Phytobacter

Phytobacter is a genus of Gram-negative bacteria recently emerging from the grouping of isolates previously assigned to various genera of the family Enterobacteriaceae. This genus was first established on the basis of nitrogen fixing isolates from wild rice in China,[1] but also includes a number of isolates obtained during a 2013 multi-state sepsis outbreak in Brazil [2] and, retrospectively, several clinical strains isolated in the 1970s in the United States that are still available in culture collections.[3] Standard biochemical evaluation panels are lacking Phytobacter spp. from their database, thus leading to misidentifications with other Enterobacterales species.[2] Bacteria belonging to this genus are not pigmented, are chemoorganotrophic and able to fix nitrogen. They are lactose fermenting, cytochrome-oxidase negative and catalase positive. Glucose is fermented with the production of gas. Colonies growing on MacConkey agar (MAC) are circular, convex and smooth with non-entire margins and a usually elevated center. Two species are currently included in Phytobacter.[2]

Colonies of P. diazotrophicus on MacConkey agar.

Phytobacter
Scientific classification
Kingdom:
Bacteria
Phylum:
Class:
Order:
Family:
?
Genus:
Phytobacter

Zhang et al. 2008
Type species
Phytobacter diazotrophicus
Species

P. diazotrophicus
P. ursingii

Species

References

  1. Zhang, Guo Xia; Peng, Gui Xiang; Wang, En Tao; Yan, Hui; Yuan, Qing Hua; Zhang, Wu; Lou, Xu; Wu, Hui; Tan, Zhi Yuan (May 2008). "Diverse endophytic nitrogen-fixing bacteria isolated from wild rice Oryza rufipogon and description of Phytobacter diazotrophicus gen. nov. sp. nov". Archives of Microbiology. 189 (5): 431–439. doi:10.1007/s00203-007-0333-7. PMID 18060384.
  2. Pillonetto, Marcelo; Arend, Lavinia N.; Faoro, Helisson; D’Espindula, Helena R.S.; Blom, Jochen; Smits, Theo H.M.; Mira, Marcelo T.; Rezzonico, Fabio (2017-11-10). "Emended description of the genus Phytobacter, its type species Phytobacter diazotrophicus (Zhang 2008) and description of Phytobacter ursingii sp. nov". International Journal of Systematic and Evolutionary Microbiology. [Epub ahead of print] (1): 176–184. doi:10.1099/ijsem.0.002477. PMID 29125457.
  3. Rezzonico, Fabio; Smits, Theo HM; Montesinos, Emilio; Frey, Jürg E.; Duffy, Brion (2009-01-01). "Genotypic comparison of Pantoea agglomerans plant and clinical strains". BMC Microbiology. 9: 204. doi:10.1186/1471-2180-9-204. ISSN 1471-2180. PMC 2764716. PMID 19772624.


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